Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MITSIVFDVDDTIYDQQAPYRIAVEKCFPDFDMSAINQAYIRFRHYSDIGFPRVMAGEWTTEYFRFWRCKETLLEFGYREIDEATGIYFQEIYEHELENI--------TMLDEMRMTLDFLKSKNVPMGIITNGPTEHQLKKVKKLGLYDYVDPKRVIVSQATGFQKPEKEIFNLAAEQFDMNPSTTLYVGDSYDNDIMGAFNGGWHSMWFNHRGRSLKPGIKPVYDVAIDNFEQLFGAVKVLFDLPDNKFIFDINDKSNPVLEMGLNNGLMMAAERLLESNMSVDKVVILLRLTAKQEKVLRMKYAR |
3QNM Chain:A ((7-222)) | ---NLFFDLDDTIWAFSRNARDTFEEVYQKY---SFDRYFDSFDHYYTL-YQRRNTELWL-EYGEGKVTKEELNRQRFFYPLQAVGVEDEALAERFSEDFFAIIPTKSGLMPHAKEVLEYL-APQYNLYILSNGFRELQSRKMRSAGVDRYF--KKIILSEDLGVLKPRPEIFHFALSATQSELRESLMIGDSWEADITGAHGVGMHQAFYNVTERTVFP-FQPTYHIHSLKELMNLLE--------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3QNM.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -102533 for 1635 contacts (-62.7/contact) +
2D Compatibility (PS) -22791 + (NN) -11704 + (LL) 5452
1D Compatibility (HY) -11200 + (ID) 2850
Total energy: -145626.0 ( -89.07 by residue)
QMean score : 0.345
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