Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSLKNIGDVSYFRLNNEINRPVNGQIPLHKDKEALTAFFKENVQPNSKAFDSITDKIAYLLKYDYLEEAFLNKYRPEFIEELSTKLFDKKFRFKSFMAAYKFYQQYALKTNDGEYYLESIEDRVLFNALYFADGDEKLATDLALEMISQRYQPATPSFLNAGRSRRGELVSCFLIQVTDD-MNAIGRSINSALQLSRIGGGVGISLSNLREAGAPIKGFAGAASGVVPVMKLFEDSFSYSNQLGQRQGAGVVYLDVFHPDIISFLSTKKENADEKVRVKTLSLGITVPDKFYELARNNQEMYLFSPYSIEREYGVPFSYIDITEKYDELVANPNITKTKINARDLETEISKLQQESGYPYIINIDTANRTNPID--GKIIMSNLCSEILQVQKPSLINDAQEYLEMGTDISCNLGSTNVLNMMTSPDFGKS-----------IKTMTRALTFVTDSSNIEAVPTIKNGNAQAHTFGLGAMGLHSYLAKNHIEYGSPESIEFTDIYFMLMNYWTLVESNNIARERQTTFVGFEKSKYADGTY-FDKYVSGKFVPQSDKVKSLFANHFIPEAKDWENLRYAVMKDGLYHQNRLAVAPNGSISYINDCSASIHPITQRIEERQ------------------EKKIGKIYYPANG--LATDTIP-----YYTSAYDMDMRKVIDVYAAATEHVDQGLSMTLFLRSELPKELYEWKTESKQTTRDLSILRNYAFNKGVKS-IYYIRTFTDDGSEVGANQCESCVI |
| 2CVS Chain:A ((133-745)) | ----------------------------------------------------------------------------------SAIVYDRDFQY-SYFGFKTLERSYLLRIN-GQV-AERPQHLIMRVALGIHGRDIEAALETYNLMSLKYFTHASPTLFNAG-TPKPQMSSCFLVAMKEDSIEGIYDTLKECALISKTAGGIGLHIHNIRSTGSYIAGTNGTSNGLIPMIRVFNNTARYVD------GAFALYLEPWHADIFDFIDIRKNHGKEEIRARDLFPALWIPDLFMKRVEENGTWTLFSPTSAP---GLSDCYGDEFEALYTRYEKEGRGKT-IKAQKLWYSILEAQTETGTPFVVYKDACNRKSNQKNLGVIKSSNLCCEIVEYSAPD------------ETAVCNLASVALPAFIETSEDGKTSTYNFKKLHEIAKVVTRNLNRVID-RNYYPVEEARKSNMRHRPIALGVQGLADTFMLLRLPFDSEEA-RLLNIQIFETIYHASMEASCELAQKDGPYETFQGSPASQGILQFDMW--------DQKPYGMW---------DWDTLRKDIMKHGVRNSLTMAPMPTASTSQILGYNECFEPVTSNMYS--FQVVNPYLLRDLVDLGIWDEGMKQYLITQNGSIQGLPNVPQELKDLYKTVWEISQKTIINMAADRSVYIDQSHSLNLFLRAP--------------TMGKLTSMHFYGWKKGLKTGMYYLRTQ----------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2CVS.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -207274 for 4897 contacts (-42.3/contact) +
2D Compatibility (PS) -58966 + (NN) -16292 + (LL) 10564
1D Compatibility (HY) -31200 + (ID) 7650
Total energy: -310818.0 ( -63.47 by residue)
QMean score : 0.382
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