Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKKLIIGIFSLIIIAILAWQGFSFLKHKEIKLQQAVVEKEIRIAEKTVEVVKRQKTERVLFLEPKGYDKSLSADILKWNQKSFEHKKFYDNQYIILRPQLADSNFANVKKLSIYQILYQKEKGSMFQKSSRLLRTYLLDQNKKPFELDELLAHNISGFKAILENIAPGTQLKEHDSNKEFLKTGRVTDGLDVKDGKLIINDLKLPLDKLYNVIDESYLKSSDLDLVSNLKAKAPRVALTFDDGPNEKTTPKALEILKRYNAKATFFVMGQS-----AVGHTDILQRMHAEGHEIGNHTWDHPNLTKLPAEKIKEEIHKTNDLIMKATGQKPVYLRPPYGATNATVKT-VTGLKEML--WSVDTEDWKNHNTQAMMTNIKK-----QLRPGG---VILMHDIH-QTSIDALPTIMDYLITQGYYFVTVGELYSTP |
| 2IW0 Chain:A ((44-237)) | -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------VALTYDDGP-FTFTPQLLDILKQNDVRATFFVNGNNWANIEAGSNPDTIRRMRADGHLVGSHTYAHPDLNTLSSADRISQMRQLEEATRRIDGFAPKYMRAPYLSCDAGCQGDLGGLGYHIIDTNLDTKDYENNKPETTHLSAEKFNNELSADVGANSYIVLSHDVHEQTVVSLTQKLIDTLKSKGYRAVTVGECLGDA |
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General information:
TITO was launched using:
| RESULT:
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Template: 2IW0.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -57063 for 1374 contacts (-41.5/contact) +
2D Compatibility (PS) -18962 + (NN) -9825 + (LL) 18312
1D Compatibility (HY) -6400 + (ID) 3200
Total energy: -77138.0 ( -56.14 by residue)
QMean score : 0.342
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