Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MNKSKKIENYQLLLLQAQALFSDETNALANLSNASAML----NAMLPNSVFTGFYLFDGKE---LILGPFQGGVSCVHITLGKGVCGESAQTAKTLIVDDVTKHANYISCDSKAMSEIVVPMFKN-GKLLGVLDLDSSLVADYDEIDQEYLEKFVGILVEHTIWNLDMFGVEK
3KO6 Chain:A ((19-173))
LNKEEILEQ---LLLSYEGLSDGQVNWVCNLSNASSLIWHAYKSLAVDINWAGFYVTQASEENTLILGPFQGKVACQMIQFGKGVCGTAASTKETQIVPDVNKYPGHIACDGETKSEIVVPIISNDGKTLGVIDIDCLDYEGFDHVDKEFLEKLAKLINKSCVF---------
General information:
TITO was launched using:
RESULT:
Template:
3KO6.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -84731 for 1127 contacts (-75.2/contact) +
2D Compatibility (PS) -16105 + (NN) -5353 + (LL) 1160
1D Compatibility (HY) -14400 + (ID) 3300
Total energy: -122729.0 ( -108.90 by residue)
QMean score : 0.436
(partial model without unconserved sides chains):
PDB file :
Tito_3KO6.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3KO6-query.scw
PDB file :
Tito_Scwrl_3KO6.pdb
: