Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MCAFFKTDTLKSCAIDQNAGSKKSATLQIARRVKKGIGDFPKTEKGNSLIVGYPQIGLSPFLF-----SHVSGHVLRLPENKSTELWEDCQILNKGHCVEMRK
2IGP Chain:A ((81-108))
-------------------------------------------------DLGYPFA-LSKSSMYTVGAPHTWPHIVAALVWLIDCIKIH--------------
General information:
TITO was launched using:
RESULT:
Template:
2IGP.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -12706 for 83 contacts (-153.1/contact) +
2D Compatibility (PS) -2326 + (NN) 1230 + (LL) 3348
1D Compatibility (HY) 0 + (ID) 350
Total energy: -10804.0 ( -130.17 by residue)
QMean score : 0.151
(partial model without unconserved sides chains):
PDB file :
Tito_2IGP.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2IGP-query.scw
PDB file :
Tito_Scwrl_2IGP.pdb
: