Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKLYVQLMVILTFSFAGEVLSTIFNLPVPGSIIGLILLFLALKYKIIRLRHIDAVGNFLLANMTILFLPPAVGLMEHFQDIKPYLFGIAIIILGALFLNILTIGLVSQWIKKRYEGDYPEIGGKNGNFNE
3W9I Chain:A ((996-1030))
------------------------------------------------------------------------------GSQHAIGTGVIGGMVTATVLAIFWVPLFYVAVSTL-----------------
General information:
TITO was launched using:
RESULT:
Template:
3W9I.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -11469 for 144 contacts (-79.6/contact) +
2D Compatibility (PS) -3463 + (NN) -253 + (LL) 7360
1D Compatibility (HY) -2000 + (ID) 250
Total energy: -10075.0 ( -69.97 by residue)
QMean score : 0.162
(partial model without unconserved sides chains):
PDB file :
Tito_3W9I.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3W9I-query.scw
PDB file :
Tito_Scwrl_3W9I.pdb
: