Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MTKLATICYIDNGKELLLLHRNKKENDVHEGKWISVGGKLEAGETPDECAKREILEETHLTVKKMDFKGVITF-----PEFTPGHDWYTYVFKVTDYEGELISDDESREGTLEWVPYDQVLSKPTWQGDYEIFKWILEDVPFFSAKFVYDEHQNLIEKTVNFYEK
3Q93 Chain:A ((24-153))
-SRLYTLVLVLQPQRVLL---GMKKRGFGAGRWNGFGGKVQEGETIEDGARRELQEESGLTVDALHKVGQIVFEFVGEPELMDVH-----VFCTDSIQGTPVESDEMRPC---WFQLDQIPFKDMWPDDSYWFPLLLQKKKFHGYFKFQGQDTILDYTLREVDTV
General information:
TITO was launched using:
RESULT:
Template:
3Q93.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -32872 for 924 contacts (-35.6/contact) +
2D Compatibility (PS) -13570 + (NN) -6665 + (LL) 1176
1D Compatibility (HY) -9600 + (ID) 2100
Total energy: -63631.0 ( -68.86 by residue)
QMean score : 0.469
(partial model without unconserved sides chains):
PDB file :
Tito_3Q93.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3Q93-query.scw
PDB file :
Tito_Scwrl_3Q93.pdb
: