Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MDLNNYIASIENYPQEGITFRDISPLMADGKAYSYAVREIVQYAADKD---IDMIVGPEARGFIVGCPVAYALGIGFAPVRKPGKLPREVISADYEKEYGLDTLTMHADAIKPGQRVLIVDDLLATGGTVKATIEMIEKLGGVVAGCAFLVELDGLNGRKAIEGYDTKVLMNFPG
1ZN9 Chain:A ((9-168))
--VEQRIRSFPDFPTPGVVFRDISPVLKDPASFRAAIGLLARHLKATHGGRIDYIAGLDSRGFLFGPSLAQELGLGCVLIRKRGKLPGPTLWASYSLEYGKAELEIQKDALEPGQRVVVVDDLLATGGTMNAACELLGRLQAEVLECVSLVELTSLKGREKLAPVPFFSLLQYE-
General information:
TITO was launched using:
RESULT:
Template:
1ZN9.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -142568 for 1209 contacts (-117.9/contact) +
2D Compatibility (PS) -16585 + (NN) -1390 + (LL) 236
1D Compatibility (HY) -14800 + (ID) 3250
Total energy: -178357.0 ( -147.52 by residue)
QMean score : 0.476
(partial model without unconserved sides chains):
PDB file :
Tito_1ZN9.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1ZN9-query.scw
PDB file :
Tito_Scwrl_1ZN9.pdb
: