Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MVKKFAFAKGIATGVVATAATLAGAAFAIKKTIIEPEEE...KIAFIEENRKKAARKRVSH
3TJ6 Chain:B ((15-23))
------------------------------NPVIEALEK----------------------
General information:
TITO was launched using:
RESULT:
Template:
3TJ6.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 1440 for 26 contacts (55.4/contact) +
2D Compatibility (PS) -833 + (NN) 1090 + (LL) 6344
1D Compatibility (HY) -800 + (ID) 150
Total energy: 7091.0 ( 272.73 by residue)
QMean score : -0.058
(partial model without unconserved sides chains):
PDB file :
Tito_3TJ6.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3TJ6-query.scw
PDB file :
Tito_Scwrl_3TJ6.pdb
: