Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKIGIDKIGFATSQYVLEMTDLAIARQVDPEKFSKGLLLDSLSITPVTEDIVTLAASAANDILS--DEDKETIDMVIVATESSIDQSKAASVYVHQLLEIQPFA--RSFEMKEACYSATAALDYAKLHVEKHP-DSK-VLVIASDIAKYGIKSTGESTQGAGSIAMLISQNPSILELKEDRLAQTRDIMDFWRPNY-SDVPYVNGMFSTKQYLDMLKTTWKEYQKRFNT-----------SLSDYAAFCFHIPFPKLALKG-----FNKILDNNLDEQK------------------------KAEL---QENFEH----SITYSKKIGNCYTGSLYLGLLSLL--ENSQNLKAGDQIAFFSYGSGAVAEIFT---------GQLVDGYQNKLQSDRMDQLNKRQKITVTEYEKL------FFEKTILDENGNANFNTYRTGTFSLDSICE-HQRIYKKINN |
| 2WYA Chain:A ((17-457)) | ------------AQYV-DQTDLEKYNNVEAGKYTVGLGQTRMGFCSVQEDINSLCLTVVQRLMERIQLPWDSVGRLEVGTETIIDKSKAVKTVLMELFQDSGNTDIEGIDTTNACYGGTASLFNAANWMESSSWDGRYAMVVCGDIAVY-PSGNARPTGGAGAVAMLIGPKAPLALERGLRGTHMENVYDFYKPNLASEYPIVDGKLSIQCYLRALDRCYTSYRKKIQNQWKQAGSDRPFTLDDLQYMIFHTPFCKMVQKSLARLMFNDFLSASSDTQTSLYKGLEAFGGLKLEDTYTNKDLDKALLKASQDMFDKKTKASLYLSTHNGNMYTSSLYGCLASLLSHHSAQEL-AGSRIGAFSYGSGLAASFFSFRVSQDAAPGSPLDKLVSS-TSDLPKRLASRKCVSPEEFTEIMNQREQFYHKVNFSPPGDT--NSLFPGTWYLERVDEQHRRKYARRPV |
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General information:
TITO was launched using:
| RESULT:
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Template: 2WYA.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -124592 for 3006 contacts (-41.4/contact) +
2D Compatibility (PS) -39130 + (NN) -14358 + (LL) 1152
1D Compatibility (HY) -23200 + (ID) 6150
Total energy: -206278.0 ( -68.62 by residue)
QMean score : 0.405
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