Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKKKIILKSSVLGLVAGTSIMFSSAFADQVGVQVIGVNDFHGALDNTGTANMPDGKVTNAGTAAQLDAYIDDAQKDFKQTNPNGESIRVQAGDMVGASPANSGLLQDEPTVKTFNAMNVEYGTLGNHEFDEGLAEYNRIVTGKAPAPDSNINNITKSYPHEAAKQEIVVANVIDKVNKQIPYNWKPYAIKNIPVNNKSVNVGFIGI----VTKDIPNLVLRKNYEQYEFLDEAETIVKYAKELQAKNVKAIVVLAH--VPATSKDDIAEGEAAEMMKKVNQLFPENSVDIVFAGHNHQYTNG--LVGKTRIVQ----ALSQGKAYADVRGVLDTDTQDFIETPSAKVVAVAPGKKTGSADIQAIVDQANTIVKQVTEAKIGTAEVSGMITRSVDQDNVSPVGSLITEAQLAIARKSWPDIDFAMTNNGGIRADLLIKPDGTITWGAAQAVQPFGNILQVVEITGRDLYKALNEQYDQKQNFFLQIA-GLRYTYTDNKEGGEETPFKVVKAYKSNGEEINPDAKYKLVINDFLFGGGDGFASFRNAKLLGAINPDTEVFMAYITDLEKAGKKVSVPNNKPKIYVTMKMVNETITQNDGTHSIIKKLYLDRQGNIVAQEIVSDTLNQTKSKSTKINPVTTIHKKQLHQFTAINPMRNYGKPSNSTTVKSKQLPKTNSEYGQSFLMSVFGVGLIGIALNTKKKHMK |
| 3IVD Chain:A ((7-463)) | -------------------------------VTIIYTNDLHAHVEPYKVPWIADGK-RDIGGWANITTLVK------QEKAKNKATWFFDAGDYF-TGPYISSLTKGKAIIDIMNTMPFDAVTIGNHEFDHGW--------------DNTLLQLSQ------AKFPIVQGNIFYQNSSKSFWD-KPYTI----IEKDGVKIGVIGLHGVFAFNDTVSAATRVGIEAR---DEIKWLQRYIDELKGK-VDLTVALIHEGVPARQSSMGGTDVRRALDKDIQTASQVKGLDILITGHAHVGTPEPIKVGNTLILSTDSGGIDVGKLVLDYKEKPHNFTVKNFELKTIYADEWKPDQQT-----KQVIDGWNKKLDEVVQQTVAQSPVE--LKRAYGES-----ASLGNLAADALLAAAGKNTQLALTNSGGIRNEI---PAGAITMGGVISTFPFPNELVTMELTGKQL-RSLMEHGASLSNGVLQVSKGLEMKYDSSKPVGQR-----VITLTLNGKPIEDATVYHIATQSFLADGGDGFTAFTEGKARNITGGYYVYHAVVDYFKAGNTITDEQLNGMRVKDIK----------------------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3IVD.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -49767 for 3872 contacts (-12.9/contact) +
2D Compatibility (PS) -47945 + (NN) -17915 + (LL) 12716
1D Compatibility (HY) -22400 + (ID) 6400
Total energy: -131711.0 ( -34.02 by residue)
QMean score : 0.376
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