Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MIKATFTRNQSGYLYSAEISGHAGSGEYGFDVICAAVSTLSINFINSLEALTT--CQAQLIINDVEGGYMKIDLSSIPQ-HKEDKVQLLFESYLLGMTNLSKDSSEFVSTIVMTH
2IDL Chain:A ((4-115))
MIQAVFERAEDGELRSAEITGHAESGEYGLDVVCASVSTLAINFINSIEKFAGYEPILEL-NE-DEGGYLMVEIPKDLPSHQREMTQLFFESFFLGMANLSENYSEFVQTRVIT-
General information:
TITO was launched using:
RESULT:
Template:
2IDL.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -72713 for 764 contacts (-95.2/contact) +
2D Compatibility (PS) -11518 + (NN) -3012 + (LL) 172
1D Compatibility (HY) -10400 + (ID) 2900
Total energy: -100371.0 ( -131.38 by residue)
QMean score : 0.498
(partial model without unconserved sides chains):
PDB file :
Tito_2IDL.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2IDL-query.scw
PDB file :
Tito_Scwrl_2IDL.pdb
: