Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MIYFDNSATTIPYPEVLRTYQEVASKIYGNPSSLHELGTTSSRILEASRKQIASLLELKANEIFFTSGGTEADNWVIKGLAFEKQHFGNH---IIVSDIEHPAIKESAKWLGEY-GFEIDYAPVDDKGFVDVEALVKLIKP--ETILISIMAINNEIGSIQPIKAISDLLSDKPTISFHIDAVQAIGKIPTKDYLTERVDFASFSSHKFHGVRGVGFLYIKEGKRISPLLTGGGQESDLRSTTENVAGIAATAKALRMVMDK-EVVAIPKISKMKTIIHDELAKYEDITLFSGKED---FSPNIITFGIKGVRGEVLVHAFEGHDIFISTTSACSSKAGKPAGTLIAMGISTKLAQTAVRISLDDDNDMGQVEQFLTIFKQVYEKTKKVRG |
| 4ISY Chain:A ((14-385)) | --YLDHAATTPMHPAAIEAMAAVQRTI-GNASSLHTSGRSARRRIEEARELIADKLGARPSEVIFTAGGTESDNLAVKGIYWARRDAEPHRRRIVTTEVEHHAVLDSVNWLVEHEGAHVTWLPTAADGSVSATALREALQSHDDVALVSVMWANNEVGTILPIAEMS-VVAMEFGVPMHSDAIQAVGQLPL-DFGASGLSAMSVAGHKFGGPPGVGALLLRRDVTCVPLMHGGGQERDIRSGTPDVASAVGMATAAQIAVDGLEENSARLRLLRDRLVEGVLAEIDDVCL-NGADDPMRLAGN-AHFTFRGCEGDALLMLLDANGIECSTGS--------PSHVLIAMGVDAASARGSLRLSLGHTSVEADVDAALEVLPGAVARARRAAL |
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General information:
TITO was launched using:
| RESULT:
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Template: 4ISY.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -157293 for 3139 contacts (-50.1/contact) +
2D Compatibility (PS) -38649 + (NN) -21243 + (LL) 1072
1D Compatibility (HY) -18400 + (ID) 5950
Total energy: -240463.0 ( -76.60 by residue)
QMean score : 0.479
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