Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MTKVVLVTGCASGIGYAQAQYFLKQGYQVYGVDKSDKPN------LNGNFNFIKLDLSSD------LSPLFTMVPTVDILCNTAGILDAYKPLLEVSDEELEHLFDINFFVTVRLTRHYLRRMVEKKSGIIINMCSIASFIAGGGGAAYTSSKHALAGFTRQLALDYAKDCIQIFGIAPGAVQTAMTASDFEPGGLAEWVASETPIGRWTKPSEVAELTGFLASGKARSMQGEIVKIDGGWSLK
3TZH Chain:A ((13-248))
--KVALVTGASRGIGKAIAELLAERGAKVIGTATSESGAQAISDYLGDNGKGMALNVTNPESIEAVLKAITDEFGGVDILVNNAGITR-DNLLMRMKEEEWSDIMETNLTSIFRLSKAVLRGMMKKRQGRIINVGSVVGTMGNAGQANYAAAKAGVIGFTKSMAREVASRGVTVNTVAPGAIETDMTKALNDEQRTATL--AQVPAGRLGDPREIASAVAFLASPEAAYITGETLHVNGGMYMI
General information:
TITO was launched using:
RESULT:
Template:
3TZH.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -151371 for 1868 contacts (-81.0/contact) +
2D Compatibility (PS) -24164 + (NN) -7961 + (LL) 740
1D Compatibility (HY) -12400 + (ID) 3700
Total energy: -198856.0 ( -106.45 by residue)
QMean score : 0.540
(partial model without unconserved sides chains):
PDB file :
Tito_3TZH.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3TZH-query.scw
PDB file :
Tito_Scwrl_3TZH.pdb
: