Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MRINKYIAHAGIASRRKAEELIKQGMVTINGQVVNELATKVKAGDLVEIEGSPIYNEEKVYYLLNKPRGVISSVSDDKGRKTVIDLLPQVKERIYPVGRLDWDTTGLLILTNDGDFTDKMIHPRNEIDKVYLARIKGIATKENLRPLTRGVVIDGKKTKPA-------------RYNIIKVDHEKNRSVVELTIHEGRNHQVKKMFEQVGLLVDKLSRTQFGTLDLTGLRPGEARRLNKKEISQLHNAAINKS |
2OML Chain:A ((15-185)) | --------------------------------------------------------------LFNKPYDVLPQFTDEAGRKTLKEFIP--VQGVYAAGRLDRDSEGLLVLTNNGALQARLTQPGKRTGKIYYVQVEGIPTQDALEALRNGVTLNDGPTLPAGAELVDEPAWLWPRNPPIR-RKSIPTSWLKITLYEGRNRQVRRMTAHVGFPTLRLIRYAMGDYSLDNLANGEWREVTD-------------- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 2OML.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -32333 for 1113 contacts (-29.1/contact) +
2D Compatibility (PS) -16474 + (NN) -3359 + (LL) 6760
1D Compatibility (HY) -11600 + (ID) 2900
Total energy: -59906.0 ( -53.82 by residue)
QMean score : 0.455
|
|
|