Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MKLKHIVLGLALTTLLGVTFSNQEVSASSTSSKVVKVGVMTFSDTEKARWDKIEKLVGDKAKIKFTEFTDYTQPNQATANKDVDINAFQHYNFLENWNKENKKNLIPLEKTYLAPIRIYSEKVKSLKKLKKGATIAIPNDATNGSRALYVLQSAGLIKLNVSGKKVATVANITSNKKDINIQELDASQTPRALKDVDAAIINNTYIEQANLKPS-DAIFVEKSDKN-SKQWINIIAGRKNWKKQKNAKAIQAILDAYHTDEVKKVIKDT--SADIPQW |
4IB2 Chain:A ((39-250)) | -------------------------------------------------------------QLEVTVFDDYVQPNEVVESGEFDANYFQHVPYLESFNEEKGTHLVDAGDIHYEPFGIYPGTKKSLDEISEGDKIAVPNDTTNEARALLLLQDNGIITLKDGAGLNATVNDIEENPYNVEIVELEAAQVARVTGETAYVVLNGNYALEAGYSVAKDALAYEKSDSEAAKTYVNIIAVKEGNEKEEK---IQALVKALKSDEIKEYIEKTYDGAVIPFE |
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General information:
TITO was launched using:
| RESULT:
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Template: 4IB2.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -19235 for 1640 contacts (-11.7/contact) +
2D Compatibility (PS) -21865 + (NN) -4836 + (LL) 5148
1D Compatibility (HY) -15600 + (ID) 3850
Total energy: -60238.0 ( -36.73 by residue)
QMean score : 0.382
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