Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MNTIVMQADKKLQEKIRTDLAQHHISNNNPYVVFSAKISGTTVLLYTSGKLVFQGSNASHIAQKYGYIEQKESCSSETQDIPIIGTDEVGNGSYFGGLAVVASFVTPKDHAYLKKLGVGDSKTLTDQKIKQIAPLLEKAIPHKALLLSPQKYNQVVGPNNKHNAVSVKVALHNQAIFLLLQDGFEPEKIVIDAFTSSKNYQNYLKNEKNQFKQ-TITLEEKAENKYLAVAVSSIIARNLFLENLNKLSDDVGYKLPSGAGHQSDKVASQLLKAYGISS-LEHCAKLHFANTKKAQALLK |
1I39 Chain:A ((4-191)) | ------------------------------------------------------------------------------------GIDEAGKGCVIGPLVVAG--VACSDEDRLRKLGVKDSKKLSQGRREELAEEIRKICRTEVLKVSPENLDE------RMAAKTINEILKECYAEIILR--LKPEIAYVD---SPDVIPERLSRELEEITGLRVVAEHKADEKYPLVAAASIIAKVEREREIERLKEKFG---DFGSGYASDPRTREVLKEWIASGRIPSCVRMRWKTVSNLRQK-- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1I39.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -55143 for 1471 contacts (-37.5/contact) +
2D Compatibility (PS) -20580 + (NN) -12957 + (LL) 6392
1D Compatibility (HY) -8400 + (ID) 2700
Total energy: -93388.0 ( -63.49 by residue)
QMean score : 0.482
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