Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSKILFFGEPLIRITP------KENDYFADSISTKLFYGGSEVNTARALQGFGQDTKLLSALPNNPIGNSFLQFLKAQGIDTHSIQWVGER-VGLYFLEDSFACR-KGEVVYDRDHSSLHDFRINQIDFDQLF-EGVSLFHFSGITLSLDESIQEITLLLLKEAKKREITISLDLNFRSKLISP--KNAKILFSQFATFADICFGIEPLMVDSQDTTFF----NRDEATIEDVKERMISLINHFDFQVIFHTKRLQDEWGRNHYQAYIANRKQEFVTSKEITTAVNQRIGSGDAFVAGALYQLLQHSDSKTVIDFAVASASLKCALEGDN-MFETVTAVNKVLNQSKDIIR |
| 2V78 Chain:A ((2-312)) | -VDVIALGEPLIQFNSFNPGPLRFVNYFEKHVA------GSELNFCIAVVRNHLSCSLIARVGNDEFGKNIIEYSRAQGIDTSHIKVDNESFTGIYFIQRGYPIPMKSELVYYRKGSA--GSRLSPEDINENYVRNSRLVHSTGITLAISDNAKEAVIKAFELAKSR----SLDTNIRPKLWSSLEKAKETILSILKK-----YDIEVLITDPDDTKILLDVTDPDEA-YRKYKE--------------LGVKVLLYKLGSKGAIAYKDNVKA-FKDAYKV--PVEDPTGAGDAMAGTFVSLYLQGKDIEYSLAHGIAASTLVITVRGDNELTPTLEDAERFLNEFK---- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2V78.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -67841 for 2725 contacts (-24.9/contact) +
2D Compatibility (PS) -31204 + (NN) -4817 + (LL) 4020
1D Compatibility (HY) -19200 + (ID) 4500
Total energy: -123542.0 ( -45.34 by residue)
QMean score : 0.423
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