Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKAISFQNVTKSFGPKKILNNVSFDLEENMIYGFVGPNGAGKTTTIKMILGLLKFDTGFITIFGKKVNFGRTDTN-----QLIGYLPDVPEYYDYMTALEYLDLCS----GLARSKHKLSNKELLRSVGLDDN-HQKIATYSRGMKQRLGLAQALVHDPKIIICDEPTSALDPKGRQDILDIISNLRGEK-TVIFSTHILSDVEKICDHVLVLTKCGIYSLEELKGKKSEENYSVRILIKVTKSEAKVLSHNYQIEKKDNEYALTLKGSKMDNKADLLAGFYQDLVSLKISPSAIEVIDNSLEELYLEVTK |
| 2OUK Chain:A ((22-242)) | LQMIDVHQLKKSFGSLEVLKGINVHIREGEVVVVIGPSGSGKSTFLRCLNLLEDFDEGEIIIDG--INLKAKDTNLNKVREEVGMVFQRFNLFPHMTVLNNITLAPMKVRKWPREKAEAKAMELLDKVGLKDKAHAYPDSLSGGQAQRVAIARALAMEPKIMLFDEPTSALDPEMVGEVLSVMKQLANEGMTMVVVTHEMGFAREVGDRVLFMD--GGYIIEEGKPEDLFDRPQHERTKAFLSKVF----------------------------------------------------------------- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 2OUK.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -154824 for 1682 contacts (-92.0/contact) +
2D Compatibility (PS) -23228 + (NN) -8558 + (LL) 4928
1D Compatibility (HY) -17200 + (ID) 3600
Total energy: -202482.0 ( -120.38 by residue)
QMean score : 0.508
|
|
|