Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMTTLITTFQERFGDWTQSLIEHLQLSLLTLILATLIAIPLGIIISHYKKISHVVLQITGIFQTIPSLALLGLFIPFMGIGTVPAVVALIIYALFPILQNTVTVLMQIDANLIEAATAFGMTRWERLKKFELALSMPVIISGIRTASVMIIGTATLASLIGAGGLGSFILLGIDRNNPSLILIGAISSAVLAIIFSGLIGLLEKARLRTIAVSGILLLAGLGLSYAPKWMPGTNTATITVAGKLGTEPDILINMYKELIEDQTDIKVKLKPNFGKTTFLYQALKSGDIDLYPEFTGTITSSLLKNPPKVSNNPKQVYNLAKNGILKQDKLSLLSPMAYQNTYAVAVKKDYAEANQLKNISDLKKL-DKLKAGFTLEFKDREDGSIGLQKHYGLNL-DISTLEPALRYQAINSKDVNIIDAYSTDSELIQYQLQILKDDKHLFPPYQGAPLLRQDTIKKYPQVKKALNKLAGHITEKEMQEMNYQVAVKHKSAATVAKQYLKAHHIIK
1SW2 Chain:A ((6-275))------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ERVVIGSKPFNEQYILANMIAILLE-ENGYKAEVKEGLGGTLVNYEALKRNDIQLYVEYTGTAYNVILRKQPPELWDQQYIFDEVKKGLLEADGVVVAAKLGFRDDYALAVRADWAEENGVEKISDLAEFADQLVFGSDPEFASRPDGLPQIKKVYGFEFKEVKQMEPTLMYEAIKNKQVDVIPAYTTDSRVDLFNLKILEDDKGALPPYDAIIIVNGNTAKD-EKLISVLKLLEDRIDTDTMRALNYQYDVEKKDAREIAMSFLKEQGLVK


General information:
TITO was launched using:
RESULT:

Template: 1SW2.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -59332 for 2316 contacts (-25.6/contact) +
2D Compatibility (PS) -28265 + (NN) -5014 + (LL) 20768
1D Compatibility (HY) -24000 + (ID) 4600
Total energy: -100443.0 ( -43.37 by residue)
QMean score : 0.399

(partial model without unconserved sides chains):
PDB file : Tito_1SW2.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1SW2-query.scw
PDB file : Tito_Scwrl_1SW2.pdb: