Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MITKEQYFYFRQLDDFKHFTIEQFDHIVSHIKHRTALKNHTLFFEGDYREKLFLIQSGHVKIEQSDASGSFIYTDYVRQGTVFPYGGLFLDDDYHFSAV-AITDIEYFSLPMALYEEYSLQNINQMKHLCRKYSKLLRVHEIRLRNMVTSSASMRVIQSLATLLLQVPTERGH---LPFPITTIEIANMSGTTRETVSHVLKELRQKDIVEMKGKKLLYNNKNYFKKFIE
4I09 Chain:A ((41-217))
----------------------------------------TLIHQGEKAETLYYIVKGSVAVLIKDEEGKEMILSYLNQGDFIGELGLFEEGQERSAWVRAKTACEVAEISYKKFRQLIQVNPDILMRLSAQMARRLQVTSEKLGNLAFLDVTGRIAQTLLNLAKQ-PDAMTHPDGMQIKITRQEIGQIVGCSRETVGRILKMLEDQNLISAHGKTIVVYGT--------
General information:
TITO was launched using:
RESULT:
Template:
4I09.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -92816 for 1185 contacts (-78.3/contact) +
2D Compatibility (PS) -18550 + (NN) -5321 + (LL) 4016
1D Compatibility (HY) -9600 + (ID) 2350
Total energy: -124621.0 ( -105.17 by residue)
QMean score : 0.411
(partial model without unconserved sides chains):
PDB file :
Tito_4I09.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4I09-query.scw
PDB file :
Tito_Scwrl_4I09.pdb
: