Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMNYEIFKAIHGLSHHNSVLDSIMVFITEYAIVAYALILLAIWLFGNTQSRKHVLYAGITGIAGLVINYLITLVYFEPRPFVAHTVHTLIPHAADASFPSDHTTGALA---ISIAMLFRNRKIGWPLVIFGLLTGF--SRIWVGHHYPVDVLGSLVVAIIIGFLFFRFSDLLRPFVDLVVRIYEAIINKLTKKPTDQNF
4PX7 Chain:A ((158-221))-----------------------------------------------------------------------------------------------AFPSGHTMFAASWALLAVGLLWPRRRTLTIAILLVWATGVMGSRLLLGMHWPRD----LVVATLISW------------------------------------


General information:
TITO was launched using:
RESULT:

Template: 4PX7.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 156 -28255 -181.12 -487.16
target 2D structure prediction score : 0.52
Monomeric hydrophicity matching model chain A : 0.52

3D Compatibility (PKB) : -181.12
2D Compatibility (Sec. Struct. Predict.) : 0.52
1D Compatibility (Hydrophobicity) : 0.52
QMean score : 0.009

(partial model without unconserved sides chains):
PDB file : Tito_4PX7.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4PX7-query.scw
PDB file : Tito_Scwrl_4PX7.pdb: