Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MYNELLENLAILVLSGFVGFAVISKVPNTLHTPLMSGTNAIHGIVVLGALVVFGEIEHPSLVLQVILFVAVVFGTLNVIGGFIVTDRMLGMFKAKKPAVPAKPDRDEALR
2G3F Chain:A ((383-413))
---------------------VIWQAPNYMYIPYHYGVNHVHQVMKNGTIVV----------------------------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
2G3F.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -13897 for 135 contacts (-102.9/contact) +
2D Compatibility (PS) -3167 + (NN) 1517 + (LL) 6580
1D Compatibility (HY) -2400 + (ID) 550
Total energy: -11917.0 ( -88.27 by residue)
QMean score : 0.218
(partial model without unconserved sides chains):
PDB file :
Tito_2G3F.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2G3F-query.scw
PDB file :
Tito_Scwrl_2G3F.pdb
: