Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKITGTVVKLGIVSVVLLFFTVMIIVIFGQMRFDRTNGYTAEFSNVSGLRQGQFVRASGVEIGKVKALHLVDGGRRVRVEFNIDRSVPLYQSTTAQIRYSDLIGNRYVELKRGEGKGANDLLPPGGLIPLSRTSPALDLDALIGGFKPVFRALDPAKVNNIANALITVFQGQGGTINDILDQTAQLTSQIAERDQAIGEVVKNLN-----IVLDTTVKHRKEFDETVNNLENLITGLRNHSDQLAGGLAHISNGAGTVADLLAENRTLVRKAVSYLDAIQQPVIDQRVELDDLLHKTPTALTALGRANGTYGDFQNFYLCDLQIKWNGFQAGGPVRTVKLFSQPTGRCTPQ |
| 3GEE Chain:A ((352-464)) | ------------------------------------------------------------------------------------------------------------------------------------------------------------KLDRAANADALIRAIADGTGTEVIGISALNGDGIDTLKQHMGDLVKNLDKLHEASVLVTSLRHYE--------------ALRNASDALQNALELIAHESET--ELIAFE---LRAALDYVGQITGKVVNEEV--------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3GEE.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 5115 for 552 contacts (9.3/contact) +
2D Compatibility (PS) -11092 + (NN) -885 + (LL) 14432
1D Compatibility (HY) -7600 + (ID) 1750
Total energy: -1780.0 ( -3.22 by residue)
QMean score : 0.129
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