Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MKAADSAESDAGADQTGPQVKAADSAESDAGELGEDACPEQALVERRPSRLRRGWLVGIAATLLALAGGLGAAGYFALRSHQESQSIAREDLAAIEAAKDCVAATQAPDAGAMSASMQKIIECGTGDFGAQASLYTSMLVEAYQAASVHVQVTDMRAAVERNNNDGSVDVLVALRVKVSNTDSDAHEVGYRLRVRMALDEGRYKIAKLDQVTK |
3V8E Chain:A ((143-184)) | --------------------------------------------------------------------------------------------------------------------------------------------------------TDMNKYLEKHHTDEVYIVGVALEY-VKATAISAAELGYKTTV------------------- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 3V8E.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) 616 for 220 contacts (2.8/contact) +
2D Compatibility (PS) -4295 + (NN) 2672 + (LL) 12560
1D Compatibility (HY) -3600 + (ID) 800
Total energy: 7153.0 ( 32.51 by residue)
QMean score : 0.075
|
|
|