Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MTVVVEKTPTTLPQATPNGAAPWHVRAGAFAIDVLPGLAVAATMALTALTVPPGSAWRWLCACLLGLTILLLAVNRLLLPTITGWSLGRALTGIRVVRRDGSAIGPWRLLVRDLAHLVDTLSLFVGWLWPLWDSRRRTFADLLLRTEVRRVEPVQRPAVIRRLTAAVALAAAGACASATAVGAAVVYVNEWQTDHTRAQLATRGPKLVVDVLSYDPETVQRDFERARSLATDRYRPQLSIQQDS--V---RESGPVRNQYWVTDSAVLSATPA-QATMLLFMQGERGTPPNQRYIQSTVRAIFQKSRGQWRLDDLAVVMKPRQPTGEK |
| 5CNL Chain:A ((4-117)) | ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------DRAQLAVWANEAIIATYTFDYKNYMQQQKEIAKYFSADGWIAYSKALNQSKLPEVVQKNAYFVNAVATEPPKLITLDPTHWQAIMPILVVYKNPQYEQKQNLKVVLGFTVASPG------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 5CNL.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -4390 for 617 contacts (-7.1/contact) +
2D Compatibility (PS) -11204 + (NN) -1900 + (LL) 17544
1D Compatibility (HY) -3200 + (ID) 650
Total energy: -3800.0 ( -6.16 by residue)
QMean score : 0.151
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