Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSPRRKFEPGEGALLAPQSIEPSRRWGLPLALTASAVVMAAAISACALMRISHESHQRAAHKDIVMLSDVRSFMTMFTSPDPFHAN--EYAERVLSHATGDFAKQYHERANDILIRISGVE-P-TTGTVLDAGVQRWNEDGSANVLVVTQITSKSA-DG----KRVVSNANRWLVTAKQEGNEWKISSLLPVI |
| 5D9R Chain:A ((677-799)) | -------------------------------------------------------------------RTAENIVSKWQKIKSLAFGPDHRIEMLPEVLDGRMLKIWTDRAAETAQLGLVYDYTLLKLSVDSVTVSA-D-GTRALVEATLEESACLSDLVHPENNATDVRTYTTRYEVFWSKSGWKITEGSVL- |
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General information:
TITO was launched using:
| RESULT:
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Template: 5D9R.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -31707 for 776 contacts (-40.9/contact) +
2D Compatibility (PS) -11905 + (NN) 3354 + (LL) 6072
1D Compatibility (HY) 1600 + (ID) 600
Total energy: -33186.0 ( -42.77 by residue)
QMean score : 0.309
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