Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MRTTVSISDEILAAAKRRARERGQSLGAVIEDALRREFAAAHVGGARPTVPVFDGGTGPRRGIDLTSNRALSEVLDEGLELNSRK
4BR2 Chain:A ((88-142))
----------------------GQSLVRCLEQALRDVPRDRHA-----STPLYLGATAGMRLLNLTSPEATARVLE---------
General information:
TITO was launched using:
RESULT:
Template:
4BR2.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -6118 for 207 contacts (-29.6/contact) +
2D Compatibility (PS) -5106 + (NN) 1239 + (LL) 2508
1D Compatibility (HY) -2400 + (ID) 950
Total energy: -10827.0 ( -52.30 by residue)
QMean score : 0.330
(partial model without unconserved sides chains):
PDB file :
Tito_4BR2.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4BR2-query.scw
PDB file :
Tito_Scwrl_4BR2.pdb
: