Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSDDHPYHVAITATAARDLQRLPEKIAAACVEFVFGPLLNNPHRL----GKPLRND-LEGLHSARRGDYRVVYAIDDGHHRVEIIHIARRSASYRMNPCRPR
1WMI Chain:A ((1-88))
----MTYRVKIHKQVVKALQSLPKAHYRRFLEFRD-ILEYEPVPREKFDVIKLEGTGDLDLYRARLGDYRVIYSVNWKDKVIKILKLKPRGRA---------
General information:
TITO was launched using:
RESULT:
Template:
1WMI.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -40582 for 528 contacts (-76.9/contact) +
2D Compatibility (PS) -9342 + (NN) -7551 + (LL) 152
1D Compatibility (HY) -5600 + (ID) 1150
Total energy: -64073.0 ( -121.35 by residue)
QMean score : 0.567
(partial model without unconserved sides chains):
PDB file :
Tito_1WMI.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1WMI-query.scw
PDB file :
Tito_Scwrl_1WMI.pdb
: