Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MHVCHTIADVVDRAKAERSENTLRKDFTPSELLAAGRRIAELERPKAKQRQREGGDHGRQARYSGLGSMEPKPESERDAHKADTAISEALGISRGHYQRLKRIDNATRSEAGYRDGLNGWSG
4GSB Chain:A ((129-160))
-HICYFLYQILRGLKYIHSANVLHRDLKPSNLL-----------------------------------------------------------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
4GSB.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -1205 for 126 contacts (-9.6/contact) +
2D Compatibility (PS) -3322 + (NN) -620 + (LL) 4076
1D Compatibility (HY) -3600 + (ID) 550
Total energy: -5221.0 ( -41.44 by residue)
QMean score : 0.613
(partial model without unconserved sides chains):
PDB file :
Tito_4GSB.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4GSB-query.scw
PDB file :
Tito_Scwrl_4GSB.pdb
: