Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MRNLFALTPMALALCTASAAWADEGEAKEGFIEGSSLQLLTRNYYFNHD-RRHASGHD-SKEWAQGFIATFQSGYTPGVVGFGVDAYGMLGLKLDGGGGTGGTSILPITSPSKEGYESGKAPDEFSSGGAALKIRAFDTELKLGDQFLSNPVVAGGESRMLPQTFRGVSLTNNSFEDLTLTAGQVSFTKYYNQSGHRRLGSYYGELPGDRDSHHLSWLGGTWG-GIEGFTSSLYAAELQNVWKQYYADVDYTYEIDDNWSLNPGAHYYKTVDSGDSLLGRIDNNTYSLHFAVGYRQHTVTAVLQKVNGNTPFDYINQGDSIFLDNSQQYSDFNGPNEKSWKLQYDYDFVALGLPGLSASASYSRGKLDLTRVDPDSPGYGGWYSADGKNAKHWERDLDLQYVVQGGPAKDLSLRLRWATHRGTGGYSAVDNDIDEYRVIVDYPIDVF |
| 2Y2X Chain:A ((4-388)) | -----------------------------GFLEDAKTDLVLRNYYFNRDF--------LVDEWAQGFILKFSSGYTPGTVGVGLDAIGLFGVKLNS-----NSELLPL-------HDDGRAADNYGRVGVAAKLRVSASELKIGEMLPDIPLLRYDDGRLLPQTFRGFAVVSRELPGLALQAGRFDAVSLRNSADMQDLSAWSAPT---QKSDGFNYAGAEYRFNRERTQLGLWHGQLEDVYRQSYANLLHKQRVGD-WTLGANLGLFVDRDDGAARAGEIDSHTVYGLFSAGIGLHTFYLGLQKVGGDSGWQSVYGSSGRSMGNDMFNGNFTNADERSWQVRYDYDFVGLGWPGLIGMVRYGHGSNATTKA--------------GSGGKEWERDVELGYTVQSGPLARLNVRLNHASNR-----RSFNSDFDQTRLVVSYPLSW- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2Y2X.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -5413 for 2967 contacts (-1.8/contact) +
2D Compatibility (PS) -38230 + (NN) -8861 + (LL) 560
1D Compatibility (HY) -24400 + (ID) 6550
Total energy: -82894.0 ( -27.94 by residue)
QMean score : 0.184
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