Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MTMNGQPAELHRPIPTLARLPRPVYARAESLRAGSWTSRHRHAWVQLSYAISGVLGVHTAEGSFFAPPQRAIWIPAQLEHEVVTSTRAEMRSLYIRGDACAWAPTRCRVLEVTPLARELIKSFCELPVDYPEGDSAESRLVQVLLDQLRLLPEVAFSLPMPREPRLLRLCQALIDE-PTQSLTMGDWAQRLGTSEKTLSRLFQRETGMNYRLWRQRQRLLASLNALEAGDSVTGAALDSGYDSTSAYIAAFKGLFGFTPGELFRQR |
2RAS Chain:A ((15-53)) | --------------------------------------------------------------------------------------------------------------------------------------------------------------------RLVDVAQAIVEERGGAGLTLSELAARAGISQANLSRYFETREDLMEAIADYWFHPMVEIMEDVLASDLPPRRKMYEFFARRFVVMRRKWEADPVKLQTYIEV |
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General information:
TITO was launched using:
| RESULT:
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Template: 2RAS.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -18567 for 209 contacts (-88.8/contact) +
2D Compatibility (PS) -4217 + (NN) -1489 + (LL) 12292
1D Compatibility (HY) -3600 + (ID) 750
Total energy: -16331.0 ( -78.14 by residue)
QMean score : 1.016
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