Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MLTQEQDQQLVERVQRGDKRAFDLLVLKYQHKILGLIVRFVHDAQEAQDVAQEAFIKAYRALGNFRGDSA-FYTWLYRIAINTAKNHLVARGRRPPDSDVTAEDAEFFEGDHALKDIESPERAMLRD--EIEATVHQTIQQLPEDLRTALTLREFEGLSYEDIATVMQCPVGTVRSRIFRAREAIDKALQPLLREA
2Z2S Chain:A ((25-181))
-----------------DEAAFAELFQHFAPKVKGFLMKSGSVASQAEECAQDVMATVWQKAHLFDPSRASVATWIFTIARNRRIDGL-RKDRQPEPEDL------FWGPD------SEPDQADVYEMQQENARLGRAIARLPEAQRALIERAFFGD----------GLPLGTIKSRI---RLALDRLRQHM----
General information:
TITO was launched using:
RESULT:
Template:
2Z2S.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -34783 for 867 contacts (-40.1/contact) +
2D Compatibility (PS) -16153 + (NN) -11284 + (LL) 4732
1D Compatibility (HY) -7200 + (ID) 2100
Total energy: -66788.0 ( -77.03 by residue)
QMean score : 0.503
(partial model without unconserved sides chains):
PDB file :
Tito_2Z2S.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2Z2S-query.scw
PDB file :
Tito_Scwrl_2Z2S.pdb
: