Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMSASAKLSRMVCLLCGFFSTGISMASSLILLSASDLAGQWTLQQDEAPAICHLELRDSEVAEASGYDLGGDTACLTRWLPSEPRAWR------PTPAGIALLERGGLTL---------MLLGRQGEGDYRVQKGDGGQLVLRRATP
4UPK Chain:A ((440-498))-------------------------------------------------------------------------------PLDPTLWQQEFGFGPSAGAVAILRDARFTLVEFAADLPPMLFDHQGEGEFRNVAGDPAHAADLARLS


General information:
TITO was launched using:
RESULT:

Template: 4UPK.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 1670 for 189 contacts (8.8/contact) +
2D Compatibility (PS) -5038 + (NN) -6740 + (LL) 5772
1D Compatibility (HY) -3600 + (ID) 850
Total energy: -8786.0 ( -46.49 by residue)
QMean score : 0.176

(partial model without unconserved sides chains):
PDB file : Tito_4UPK.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4UPK-query.scw
PDB file : Tito_Scwrl_4UPK.pdb: