Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MTSHAFARWNLLLLVASIFAGLVFAPSVDLSALPTPEARKWVLAEVPSVAVDTTVAGKLAGMSWWGRTVDEEREAESKRVSVGVDGVALIKVDWLLRGIVRDEGGIFALVAKSAEGPLRRFAAGATLPGGERLESITEQGIRFSFSQDGNTQGFERKLYAPLP |
1N52 Chain:A ((160-195)) | --------------------------------------------DVPQVRRDWYVYAFLSSLPWVGKELYEKKDAEMDRIFANTESYLKRRQKTHVPMLQVWTADKPHPQEEYLDCLWAQIQKLKKDRWQERHILRPYLAFDSILCEALQHNLPPFTPPPHTE |
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General information:
TITO was launched using:
| RESULT:
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Template: 1N52.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 2311 for 155 contacts (14.9/contact) +
2D Compatibility (PS) -3566 + (NN) 454 + (LL) 4104
1D Compatibility (HY) -3200 + (ID) 600
Total energy: -497.0 ( -3.21 by residue)
QMean score : 0.059
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