Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MMGVNANISESLTGTIEAPFPEFEAPPANPMEVLRNWLERARRYGVREPRALALATVDGQGRPSTRIVVIAELGERGVVFATHADSQKGRELAQNPWASGVLYWRESSQQIILNGRAERLPDERADAQWLSRPYQTHPMSIASRQSETLADIHALRAEARRLAET--DGPLPRPPGYCLFELCLESVEFWGNGTERLHERLRYDRDEGGWKHRYLQP
1G78 Chain:A ((28-218))
--------------------------PADPLTLFERWLSQACEAKLADPTAMVVATVDEHGQPYQRIVLLKHYDEKGMVFYTNLGSRKAHQIENNPRVSLLFPWHTLERQVMVIGKAERLSTLEVMKYFHSRPRDSQIGAWVSKQSSRISARGILESKFLELKQKFQQGEVPLPSFWGGFRVSLEQIEFWQGGEHRLHDRFLYQRENDAWKIDRLAP
General information:
TITO was launched using:
RESULT:
Template:
1G78.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -65296 for 1331 contacts (-49.1/contact) +
2D Compatibility (PS) -20903 + (NN) -11839 + (LL) 1428
1D Compatibility (HY) -12800 + (ID) 3100
Total energy: -112510.0 ( -84.53 by residue)
QMean score : 0.581
(partial model without unconserved sides chains):
PDB file :
Tito_1G78.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1G78-query.scw
PDB file :
Tito_Scwrl_1G78.pdb
: