Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MRPEPTNAPAALSRRFSVAPMMDWTDRHCRFFLRQLSRHTLLYTEMVTTGALLHGDRQRFLRYDECEHPLALQLGGSVPAELAACARLAEEAGYDEVNLNVGCPSDRVQHNMIGACLMGHPALVADCVKAMLDAV--EIAVTVKHRIGINGRDSYAELCDFVGQVREAGCRSFTVHARIAILEGLSPKENREVPPLRYEVAAQLKKDFPDLEIVLNGGIKTLEACRE--HLQTFDGVMLGREAYHNPYLLAAVDSQLFGSEAPPLSRSEALLRLRPYIERHQAEGGAMHHVTRHILGLAQGFPGSRRFRQLLSVDVHKAADPLRVFDQALELLAGR |
4BF9 Chain:A ((90-295)) | -----------------------------------------------------------------------VQLLGQFPQWLAENAARAVELGSWGVDLNCGCPSKTVNGSGGGATLLKDPELIYQGAKAMREAVPAHLPVSVKVRLGWDSGEKKFEIADAVQQ---AGATELVVHGR-------TKEQGYRAEHIDWQAIGDIRQRL-NIPVIANGEIWDWQSAQQCMAISGCDAVMIGRGALNIPNL-----SRVVKYNEPRMPWPEVVALLQKYTRLEKQGDTGLYHVAR------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4BF9.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -114134 for 1551 contacts (-73.6/contact) +
2D Compatibility (PS) -22344 + (NN) -14621 + (LL) 10116
1D Compatibility (HY) -11200 + (ID) 3050
Total energy: -155233.0 ( -100.09 by residue)
QMean score : 0.502
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