Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MPNVRNPFDLLLLPTWIVPVEPAGVVLRDHALGIRDGQIALVAPREQAMRHGATEIRELPGMLLAPGLVNAHGHSAMSLFRGLADDLPLMTWLQDHIWPAEGQWVSEDFIRDGTELAIAEQVKGGITCFSDMYFYPQAICGVVHDSGVRAQVAIPVLDFPIPGARDSAEAIRQGMALFDDLK-HHPRIRIAFGPHAPYTVSDDKLEQILVLTEELDASIQMHVHETAFEVEQAMERNGERPLARLHRLGLLGPRFQAVHMTQVDNDDLAMLVETNSSVIHCPESNLKLASGFCPVEKLWQAGVNVAIGTDGAASNNDLDLLGETRTAALLAKAVYGQATALDAHRALRMATLNGARALGLERLIGSLEAGKAADLVAFDLSGLAQQPVYDPVSQLIYASGRDCVRHVWVGGRQLLDDGRLLRHDEQRLIARAREWGAKIAASDRS |
| 2PLM Chain:A ((41-392)) | ---------------------------------------------------------DLSGKLVMPALFNTHTHAPMTLLRGVAEDLSFEEWLFSKVLPIEDR-LTEKMAYYGTILAQMEMARHGIAGFVDMYFHEEWIAKAVRDFGMRALLTRGLVD----SNGDDGGRLEENLKLYNEWNGFEGRIFVGFGPHSPYLCSEEYLKRVFDTAKSLNAPVTIHLYETSKE---------EYDLEDILNIGLKEVKTIAAHCVHLPERYFGVLKDIPFFVSHNPASNLKLGNGIAPVQRMIEHGMKVTLGTDGAASNNSLNLFFEMRLASLLQKA--QNPRNLDVNTCLKMVTYDGAQAMGFKS--GKIEEGWNADLVVIDLDLPEMFPVQNIKNHLVHAFSGE-VFATMVAGKWIYFDGEYPTIDSEEV----------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2PLM.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -179717 for 3192 contacts (-56.3/contact) +
2D Compatibility (PS) -37823 + (NN) -13079 + (LL) 7296
1D Compatibility (HY) -26000 + (ID) 6150
Total energy: -255473.0 ( -80.04 by residue)
QMean score : 0.449
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