Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MAELQRASVTGGGLYERLLQRLALALDEADTAERLR--DEHPTELELRGLSEAEMGLIRAYL---DQD--LHWLRGWHAAAEELA-------LLERQPGR--TPRPPRPQPPAPRRHVSLKQRQLLCALCGAPVQWSKGHGVLPCGHCGSQLFRSGNGR
4ZNM Chain:A ((105-190))
-------------------------LGDVDESERVRRGEELLNEVESTGLSVRELPLLRAVLGRFDQKDAVLVLIAHHTAADAWAMHVIARDLLNLYAARRGNPVPPLPEP------------------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
4ZNM.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -2236 for 290 contacts (-7.7/contact) +
2D Compatibility (PS) -7146 + (NN) -4439 + (LL) 4000
1D Compatibility (HY) -4400 + (ID) 1300
Total energy: -15521.0 ( -53.52 by residue)
QMean score : 0.125
(partial model without unconserved sides chains):
PDB file :
Tito_4ZNM.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4ZNM-query.scw
PDB file :
Tito_Scwrl_4ZNM.pdb
: