Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMAQVKRIRRSISGILVLDKPRGMSSNQALQKVRWLLNAEKAGHTGSLDPLATGVLPLCFGEATKFSQYLLDADKGYETVMRMGITTTTGDAEGELLAERDVTVGRDDLEQALPRFRGDIEQVPPMYSALKKDGQPLYKLARAGEVVEREARSVTITRLDLLSFEPPCATLAVSCSKGTYVRTLVEDLGQVLGCGAHVAALRRTQAGPFALAQAITLETLERVHAEGGPEALDQFLMPEDSGLLHWPVLQLSEHSAYYWLHGQPVRAPEAPKF-GW-----LRVQDHTGRFIGIGEVTDDGRIAPRRLIRS
2AB4 Chain:A ((4-287))------------GILVAYKPKGPTSHDVVDEVRKKLKTRKVGHGGTLDPFACGVLIIGVNQGTRILEFYKDLKKVFWVKMRLGLITETFDITGEVVEERECNVTEEEIREAIFSFVGEYDQVPPAYSAKKYKGERLYKLAREGKIINLPPKRVKIFKIWDVNIEGRDVSFRVEVSPGTYIRSLCMDIGYKLGCGATAVELVRESVGPHTIEESLNV-------FEAAPEEIENRIIPLEKCLEWLPRVVVHQESTKMILNGSQIHLEMLKEWDGFKKGEVVRVFNEEGRLLALAE---------------


General information:
TITO was launched using:
RESULT:

Template: 2AB4.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -132984 for 2126 contacts (-62.6/contact) +
2D Compatibility (PS) -28011 + (NN) -2431 + (LL) 3032
1D Compatibility (HY) -21200 + (ID) 4550
Total energy: -186144.0 ( -87.56 by residue)
QMean score : 0.429

(partial model without unconserved sides chains):
PDB file : Tito_2AB4.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-2AB4-query.scw
PDB file : Tito_Scwrl_2AB4.pdb: