Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MNFPHLFSPLEIRGKRLKNRIMSSGH-DTSMPTDNLVNEPLVAYHRARARGGAGLIVMQVAGVHDSARYTSHVLMATDDACIPGYRRVAEACHAEGCVVLSQIFHPGREIMESADGLLAVAYSASASPNERFRVMPRELDQPLIDEIVAGYAAAARRLHQAGLDGVEVVASHGYLPAQFLNPRVNRRTDGYNGDLDARLRFLREVLAAVRAATSEDFIVGLRLSADERDPEGLSESESLQAAEAVQGELDYLHIVAGTSASLGGAIHIVPPMAIEPAYLAREASTFKARLAIPLFVTGRINQPQEAEAILARGQADVCGMTRALICDPQMPNKAEAGRSDDVRACIACNQACIGHFHRGYPISCIQHPETGRELTYATPNPASRRKRVLVAGGGPAGMKAAAVAAQRGHEVVLCEAGAQLGGQVNLAQLLPRRAEFGGASTNLQREMQLAGVEVRRNTPVDRALVERERPDLVIVATGAEPYWPPFERGGELQVVDAWQVLRGEVRVGRSVLVTDWRGDWIGPGIAEKLVREGHQVRLAVNGTHCGESLPLYVRDQLAGELHRLGIPVTPYARLYGCDDTTVYMQHSASGEAMLFEEVDTLVLCQGHQPVDRLADSLHGLAEVLRIGDCLAPRTAEEAIYEGLKAAWSI |
| 3KRU Chain:A ((4-314)) | -----LHMPLKIKDITIKNRIMMSPMCMYSASTDGMPNDWHIVHYATRAIGGVGLIMQEATAVESRGRITDHDLGIWNDEQVKELKKIVDICKANGAVMGIQLAHAGRKCNISYEDVVG---PSPIKAGDRYK-LPRELSVEEIKSIVKAFGEAAKRANLAGYDVVEIHAAHGYLIHEFLSPLSNKRKDEYGNSIENRARFLIEVIDEVRKNWPENKPIFVRVSADDYMEGGINIDMMVEYINMIKDKVDLIDV------SSGGLLNV--DINLYPGYQVKYAETIKKRCNIKTSAVGLITTQELAEEILSNERADLVALGRELLRNP--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3KRU.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -181211 for 2792 contacts (-64.9/contact) +
2D Compatibility (PS) -33951 + (NN) -15740 + (LL) 22128
1D Compatibility (HY) -17600 + (ID) 5000
Total energy: -231374.0 ( -82.87 by residue)
QMean score : 0.578
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