Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MATSRYEPVAEIGVGAYGTVYKARD-PHSGHFVALKSVRVPNGGGGGGGLPISTVREVALLRRLEAFEHPNVVRLMDVCATSRTDREIKVTLVFEHVDQDLRTYLDKAPPPGLPAETIKDLMRQFLRGLDFLHANCIVHRDLKPENILVTSGGTVKLADFGLARIYSYQMALTPVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRKPLFCGNSEADQLGKIFDLIGLPPEDDWPRDVSLPRGAFPPRGPRPVQSVVPEMEESGAQLLLEMLTFNPHKRISAFRALQHSYLHKDEGNPE
2EUF Chain:B ((10-305))
--DQQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEG---MPLSTIREVAVLRHLETFEHPNVVRLFDVCTVSRTDRETKLTLVFEHVDQDLTTYLDKVPEPGVPTETIKDMMFQLLRGLDFLHSHRVVHRDLKPQNILVTSSGQIKLADFGLARIYSFQMALTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQLGKILDVIGLPGEEDWP--------------AQPIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSALSHPYFQDLER---
General information:
TITO was launched using:
RESULT:
Template:
2EUF.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -184327 for 2176 contacts (-84.7/contact) +
2D Compatibility (PS) -30779 + (NN) -23767 + (LL) -204
1D Compatibility (HY) -38400 + (ID) 10050
Total energy: -287527.0 ( -132.14 by residue)
QMean score : 0.510
(partial model without unconserved sides chains):
PDB file :
Tito_2EUF.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2EUF-query.scw
PDB file :
Tito_Scwrl_2EUF.pdb
: