Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MPIPNNPGAGENAFDPVFVNDDDGYDLDSFMIPAHYKKYLTKVLVPNGVIKNRIEKLAYDIKKVYNNEEFHILCLLKGSRGFFTALLKHLSRIHNYSAVETSKPLFGEHYVRVKSYCNDQSTGTLEIVSEDLSCLKGKHVLIVEDIIDTGKTLVKFCEYLKKFEIKTVAIACLFIKRTPLWNGFKADFVGFSIPDHFVVGYSLDYNEIFRDLDHCCLVNDEGKKKYKATSL
4IJQ Chain:A ((14-223))
----------------VISDDEPGYDLDLFCIPNHYAEDLERVFIPHGLIMDRTERLARDVMKEMGGHHIVALCVLKGGYKFFADLLDYIKALNRNS--DRSIPMTVD-FIRLK---------------DDLSTLTGKNVLIVEDIIDTGKTMQTLLSLVRQYNPKMVKVASLLVKRTPRSVGYKPDFVGFEIPDKFVVGYALDYNEYFRDLNHVCVISETGKAKYKA---
General information:
TITO was launched using:
RESULT:
Template:
4IJQ.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -198807 for 1508 contacts (-131.8/contact) +
2D Compatibility (PS) -20638 + (NN) -3622 + (LL) 932
1D Compatibility (HY) -22400 + (ID) 4800
Total energy: -249335.0 ( -165.34 by residue)
QMean score : 0.590
(partial model without unconserved sides chains):
PDB file :
Tito_4IJQ.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4IJQ-query.scw
PDB file :
Tito_Scwrl_4IJQ.pdb
: