Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MSKATYKERAATHPSPVAAKLFNIMHEKQTNLCASLDVRTTKELLELVEALGPKICLLKTHVDILTDFSMEGTVKPLKALSAKYNFLLFEDRKFADIGNTVKLQYSAGVYRIAEWADITNAHGVVGPGIVSGLKQAAEEVTKEPRGLLMLAELSCKGSLATGEYTKGTVDIAKSDKDFVIGFIAQRDMGGRDEGYDWLIMTPGVGLDDKGDALGQQYRTVDDVV-STGSDIIIVGRGLFAKGRDAKVEGERYRKAGWEAYLRRCGQQN |
3BGJ Chain:A ((49-290)) | ---------------PVASKLLRLMQKKETNLCLSADVSLARELLQLADALGPSICMLKTHVDILNDFTLD-VMKELITLAKCHEFLIFEDRKFADIGNTVKKQYEGGIFKIASWADLVNAHVVPGSGVVKGLQEVGLPLH---RGCLLIAEMSSTGSLATGDYTRAAVRMAEEHSEFVVGFISGSRVSMKPE---FLHLTPGVQLEAGGDNLGQQYNSPQEVIGKRGSDIIIVGRGIISAA-DRLEAAEMYRKAAWEAYLSRLG--- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3BGJ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -162717 for 2080 contacts (-78.2/contact) +
2D Compatibility (PS) -25510 + (NN) -3872 + (LL) 976
1D Compatibility (HY) -27200 + (ID) 6450
Total energy: -224773.0 ( -108.06 by residue)
QMean score : 0.648
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