Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MTPTDFTSPIPNMADDYGSESTSSMEDYVNFNFTDFYCEKNNVRQFASHFLPPLYWLVFIVGALGNSLVILVYWYCTRVKTMTDMFLLNLAIADLLFLVTLPFWAIAAADQWKFQTFMCKVVNSMYKMNFYSCVLLIMCISVDRYIAIAQAMRAHTWREKRLLYSKMVCFTI--WVLAAALCIPEILYSQIKEESGIAICTMVYPSDESTKLKSAVLTLKVILG-FFLPFVVMACCYTIIIHTLIQAKKSSKHKALKVTITVLTVFVLSQFPYNCILLVQTIDAYAMFISNCAVSTNIDICFQVTQTIAFFHSCLNPVLYVFVGERFRRDLVKTLKNLGCISQAQWVSFTRREGSLKLSSMLLETTSGALSL |
4XT1 Chain:A ((23-310)) | ---------------DYDEDATPCV-------FTDVLNQSKPVTLF-------LYGVVFLFGSIGNFLVIFTITWRRRIQCSGDVYFINLAAADLLFVCTLPLWMQYLLD-----SVPCTLLTACFYVAMFASLCFITEIALDRYYAIVY-MRYRPVKQACL-------FSIFWWIFAVIIAIPHFMVVTKKDNQ----CMTDYDYLEVSY--PIILNVELMLGAFVIPLSVISYCYYRISRIVAVSQSRHKGRIVRVLIAVVLVFIIFWLPYHLTLFVDTLKLLKWISSSCEFERSLKRALILTESLAFCHCCLNPLLYVFVGTKFRQELHCLLAEFR--------------------------------- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 4XT1.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -260605 for 2023 contacts (-128.8/contact) +
2D Compatibility (PS) -28559 + (NN) -7615 + (LL) 5680
1D Compatibility (HY) -39200 + (ID) 4650
Total energy: -334949.0 ( -165.57 by residue)
QMean score : 0.227
|
|
|