Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MDETGNLTVSSATCHDTIDDFRNQVYSTLYSMISVVGFFGNGFVLYVLIKTYHKKSAFQVYMINLAVADLLCVCTLPLRVVYYVHKGIWLFGDFLCRLSTYALYVNLYCSIFFMTAMSFFRCIAIVFPVQNINLVTQKKARFVCVGIWIFVILTSSPFLMAKPQKDEKNNTKCF---EPPQDNQTKNHVLVLHYVSLFVGFIIPFVIIIVCYTMII-----LTLLKKSMKKNLSSHKKAIGMIMVVTAAFLVSFMPYHIQRTIHLHFLHNETKPCDSVLRMQKSVVITLSLAASNCCFDPLLYFFSGGNFRKRLSTFRKHSLSSVTYVPRKKASLPEKGEEICKV |
4EA3 Chain:A ((131-405)) | ----------------------------LYLAVCVGGLLGNCLVMYVILRHTKMKTATNIYIFNLALADTLVLLTLPFQGTD-ILLGFWPFGNALCKTVIAIDYYNMFTSTFTLTAMSVDRYVAICHP-------TSSKAQAVNVAIWALASVVGVPVAIMGSAQVEDEEIECLVEIPTPQDYWGPVFAICIFLFS----FIVPVLVISVCYSLMIRRLRGVRLLSGSREKD-RNLRRITRLVLVVVAVFVGCWTPVQVFVLAQGLGVQPSSETAVAILRF------CTALGYVNSCLNPILYAFLDENFK---ACFR--------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4EA3.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -236330 for 1957 contacts (-120.8/contact) +
2D Compatibility (PS) -26001 + (NN) 1340 + (LL) 5396
1D Compatibility (HY) -24000 + (ID) 4150
Total energy: -283745.0 ( -144.99 by residue)
QMean score : 0.249
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