Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MQRPGPRLWLVLQVMGSCAAISSMDMERPGDGKCQPIEIPMCKDIGYNMTRMPNLMGHENQREAAIQLHEFAPLVEYGCHGHLRFFLCSLYAPMCTEQVSTPIPACRVMCEQARLKCSPIMEQFNFKWPDSLDCRKLPNKNDPNYLCMEAPNNGSDEPTRGSGLFPPLFRPQRPHSAQEHPLKDGGPGRGGCDNPGKFHHVEKSASCAPLCTPGVDVYWSREDKRFAVVWLAIWAVLCFFSSAFTVLTFLID-PARFRYPERPIIFLSMCYCVYSVGYLIRLFAGAE-SIACDRDSGQLYVIQEGLESTGCTLVFLVLYYFGMASSLWWVVLTLTW---FLAAGKKWGHEAIEANSSYFHLAAWAIPAVKTILILVMRRVAGDELTGVCYVGSMDVNALTGFVLIPLACYLVIGTSFILSGFVALFHIRRVMK--TGGENTDKLEKLMVRIGLFSVLYTVPATCVIACYFYERLNMDYWKILAAQHKCKMNNQTKTLDCLMAASIPAVEIFMVKIFMLLVVGITSGMWIWTSKTLQSWQQVCSRRLKKKSRRKPASVITSGGIYKKAQHPQKTHHGKYEIPAQSPTCV |
| 4N4W Chain:A ((121-471)) | ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------DNPKSWY--EDVEGCGIQCQNPLFTEAEHQDMH---SYIAAFGAVTGLCTLFTLATFVADWRNSNRYPAVILFYVNACFFVGSIGWLAQFMDGARREIVCRADGTMRLGEPTSNETLSCVIIFVIVYYALMAGVVWFVVLTYAWHTSFKALGTT--YQPLSGKTSYFHLLTWSLPFVLTVAILAVAQVDGDSVSGICFVGYKNYRYRAGFVLAPIGLVLIVGGYFLIRGVMTLFSIKSNHPGLLSE---SKINETMLRLGIFGFLAFGFVLITFSCHFYDFFNQAEWERSFRDYVLCQA------DCEI-KNRPSLLVEKINLFAMFGTGIAMSTWVWTKATLLIWRRTWCRLT------------------------------------------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 4N4W.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -272704 for 2568 contacts (-106.2/contact) +
2D Compatibility (PS) -33440 + (NN) -10231 + (LL) 11908
1D Compatibility (HY) -27600 + (ID) 4800
Total energy: -336867.0 ( -131.18 by residue)
QMean score : 0.294
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