Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MAWRGAGPSVPGAPGGVGLSLGLLLQLLLLLGPARGFGDEEERRCDPIRISMCQNLGYNVTKMPNLVGHELQTDAELQLTTFTPLIQYGCSSQLQFFLCSVYVPMCTEKINIPIGPCGGMCLSVKRRCEPVLKEFGFAWPESLNCSKFPPQNDHNHMCMEGPGDEEVPLPHKTPIQPGEECHSVGTNSDQYIWVKRSLNCVLKCGYDAGLYSRSAKEFTDIWMAVWASLCFISTAFTVLTFLID-SSRFSYPERPIIFLSMCYNIYSIAYIVRLTVG-RERISCDFEEAAEPVLIQEGLKNT--GCAIIFLLMYFFGMASSIWWVILTLTWFLA-AGLKWGHEAIEMHSSYFHIAAWAIPAVKTIVILIMRLVDADELTGLCYVGNQNLDALTGFVVAPLFTYLVIGTLFIAAGLVALFKIRSNLQK--DGTKTDKLERLMVKIGVFSVLYTVPATCVIACYFYEISNWALFRYSADD-------------SNMAVEMLKIFMSLLVGITSGMWIWSAKTLHTWQKCSNRLVNSGKVKREKRGNGWVKPGKGSETVV |
| 4N4W Chain:A ((126-472)) | ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------WYEDVEGCGIQC--QNPLFTEAEHQDMHSYIAAFGAVTGLCTLFTLATFVADWRNSNRYPAVILFYVNACFFVGSIGWLAQFMDGARREIVC---RADGTMRLGEPTSNETLSCVIIFVIVYYALMAGVVWFVVLTYAWHTSFKALGTTYQPLSGKTSYFHLLTWSLPFVLTVAILAVAQVDGDSVSGICFVGYKNYRYRAGFVLAPIGLVLIVGGYFLIRGVMTLFSIKSNHPGLLSE---SKINETMLRLGIFGFLAFGFVLITFSCHFYDFFNQAEWERSFRDYVLCQADCEIKNRPSLLVEKINLFAMFGTGIAMSTWVWTKATLLIWRRTWCRLT------------------------- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 4N4W.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -286938 for 2435 contacts (-117.8/contact) +
2D Compatibility (PS) -31679 + (NN) -3353 + (LL) 9400
1D Compatibility (HY) -28800 + (ID) 4600
Total energy: -345970.0 ( -142.08 by residue)
QMean score : 0.274
|
|
|