Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MESSFSFGVILAVLASLIIATNTLVAVAVLLLIHKNDGVSLCFTLNLAVADTLIGVAISGLLTDQLSSPSRPTQKTLCSLRMAFVTSSAAASVLTVMLITFDRYLAIKQPFRYLKIMSGFVAGACIAGLWLVSYLIGFLPLGIPMFQQTAYK--------GQCSFFAVFHPHFVLTLSCVGFFPAMLLFVFFYCDMLKIASMHSQQIRKMEHAGAMAGGYRSPRT--PSDFKALRTVSVLIGSFALSWTPFLITGIVQVACQECHLYLVLERYLWLLGVGNSLLNPLIYAYWQKEVRLQLYHMALGVKKVLTSFLLFLSARNCGPERPRESSCHIVTISSSEFDG |
2Y02 Chain:A ((15-285)) | -------SLLMALVVLLIVAGNVLV-IAAIGSTQRLQTLTNLFITSLACADLVVGLLVVPFGATLVVRGTWLWGSFLCELWTSLDVLCVTASIETLCVIAIDRYLAITSPFRYQSLMTRARAKVIICTVWAISALVSFLPIMMHWWRDEDPQALKCYQDPGCCDF--VTNRAYAIASSIISFYIPLLIMIFV---ALRVYREAKEQ----------------SRVMLMREHKALKTLGIIMGVFTLCWLPFFLVNIVNVFNRDLVPDWLFVAFNW-LGYANSAMNPIIYCRSPDFRKAFKRLLA----------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2Y02.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -233353 for 1835 contacts (-127.2/contact) +
2D Compatibility (PS) -25425 + (NN) -10929 + (LL) 5760
1D Compatibility (HY) -28000 + (ID) 3650
Total energy: -295597.0 ( -161.09 by residue)
QMean score : 0.376
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