Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MANTTGEPEEVSGALSPPSASAYVKLVLLGLIMCVSLAGNAILSLLVLKERALHKAPYYFLLDLCLADGIRSAVCFPFVLASVRHGSSWTFSALSCKIVAFMAVLFCFHAAFMLFC-ISVTRYMAIAHHRFYAKRMTLWTCAAVICMAWTLSVAMAFPPVF-------DVGTYKFIREEDQCIF--EHRYFKANDTLGFMLMLAVLMAATHAVYGKLLLFEYRHRKMKPVQMVPAISQNWTFHGPGATGQAAANWIAGFGRGPMPPTLLGIRQNGHAASR-RLLGMDEVKGEKQLGRMFYAITLLFLLLWSPYIVACYWRVFVKACAVPHRYLATAVWMSFAQAAVNPIVCFLLNKDLKKCLRTHAPCWGTGGAPAPREPYCVM |
| 2YCZ Chain:A ((16-294)) | --------------------------LLMALVVLLIVAGNVLVIAAIGSTQRLQTLTNLFITSLACADLVVGLLVVPFGATLVVRGT-WLWGSFLCELWTSLDVL-CVTASIETLCVIAIDRYLAITSPFRYQSLMTRARAKVIICTVWAISALVSFLPIMMHWWRDEDPQALKCYQDPGCCDFVTNRAYAIASSIISFYIPLLIMIFVALRV--------YREAKEQ------------------------------------------IRKIDRASKRKRVMLMREHKALKTLG----IIMGVFTLCWLPFFLVNIVNVFNRDL-VPDWLFVAFNWLGYANSAMNPII-YCRSPDFRKAFKRLLAF---------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2YCZ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -259986 for 1953 contacts (-133.1/contact) +
2D Compatibility (PS) -27973 + (NN) -14881 + (LL) 4208
1D Compatibility (HY) -28800 + (ID) 3750
Total energy: -331182.0 ( -169.58 by residue)
QMean score : 0.265
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